# 16.2 Example: Fal biota (one-way case)

Let's look at an example of a means plot for a one-way case using biotic data ($p$ = 131 taxa) from the Fal estuary. The data consist of counts of organisms living in benthic sediments obtained from $n$ = 5-7 sites in each of 5 creeks running into the Fal estuary, Cornwall, UK ({{@954#bkmrk-somerfieldetal1994a}}, {{@954#bkmrk-somerfieldetal1994b}}). These 5 creeks had differing levels of heavy metals in their sediments, due to historical tin and copper mining in their respective valleys. Interest lies in identifying whether the 5 creeks also differed in their diversity of benthic infauna. The full set of biotic data (macrofauna and also the meiofauna - comprised of nematodes and copepods) are contained in the file '<ins>Fal_all_biotic_taxa.pri</ins>', found in the <ins>'Fal_benthic_fauna</ins>' folder in '<ins>Examples_P8</ins>'.

1. Start by calculating some univariate diversity measures for each sample. Open the '<ins>Fal_all_biotic_taxa.pri</ins>' file in PRIMER 8, then click **Analyse** > **DIVERSE...**, take all the defaults and click '**OK**'.

[![02._Diverse_Fal_estuary.png](https://learninghub.primer-e.com/uploads/images/gallery/2026-07/scaled-1680-/02-diverse-fal-estuary.png)](https://learninghub.primer-e.com/uploads/images/gallery/2026-07/02-diverse-fal-estuary.png)

This will produce a sheet, called '<ins>Data1</ins>' with values for various diversity indices for each of the sampling units.

[![03._Diversity_data_Fal.png](https://learninghub.primer-e.com/uploads/images/gallery/2026-07/scaled-1680-/03-diversity-data-fal.png)](https://learninghub.primer-e.com/uploads/images/gallery/2026-07/03-diversity-data-fal.png)

2. Calculate a means plot that shows the means $\pm$ 1 standard error for the 5 creeks for each of these diversity measures. From the '<ins>Data1</ins>' sheet, click **Plots** > **Means Plot...**.

[![04._Diverse_Fal_Means_plot_menu.png](https://learninghub.primer-e.com/uploads/images/gallery/2026-07/scaled-1680-/04-diverse-fal-means-plot-menu.png)](https://learninghub.primer-e.com/uploads/images/gallery/2026-07/04-diverse-fal-means-plot-menu.png)

Leave all of the defaults and click '**OK**'.

[![05._Diverse_Fal_Means_plot_dialog_b.png](https://learninghub.primer-e.com/uploads/images/gallery/2026-07/scaled-1680-/05-diverse-fal-means-plot-dialog-b.png)](https://learninghub.primer-e.com/uploads/images/gallery/2026-07/05-diverse-fal-means-plot-dialog-b.png)

The result will be a 'Multi plot' item, that includes 6 individual plots - one for each of the 6 diversity measure variables in the original '<ins>Data1</ins>' sheet.

[![06._Diverse_Fal_Multi-plot.png](https://learninghub.primer-e.com/uploads/images/gallery/2026-07/scaled-1680-/06-diverse-fal-multi-plot.png)](https://learninghub.primer-e.com/uploads/images/gallery/2026-07/06-diverse-fal-multi-plot.png)

3. View an individual plot by clicking on it. For example, you can click on the plot in the top left-hand corner of '<ins>MultiPlot1</ins>' to see a means plot for the variable of species richness ('S', the number of different taxa). Alternatively, you can click on '<ins>Graph1</ins>' in the Explorer tree.

[![07._Diverse_Fal_Species_richness.png](https://learninghub.primer-e.com/uploads/images/gallery/2026-07/scaled-1680-/07-diverse-fal-species-richness.png)](https://learninghub.primer-e.com/uploads/images/gallery/2026-07/07-diverse-fal-species-richness.png)

4. To change the colours, symbols or line types, you can click **Graph** > **Special...**, which shows you a dialog with a plethora of options to modify all of these details of your means plot. For example, you can click the 'Key...' button next to the factor to change the colours/symbols, or choose to $\bullet$ **Join means**, including the option to choose a custom colour for the joining line, like this:

[![08._Diverse_Fal_S_join_means.png](https://learninghub.primer-e.com/uploads/images/gallery/2026-07/scaled-1680-/08-diverse-fal-s-join-means.png)](https://learninghub.primer-e.com/uploads/images/gallery/2026-07/08-diverse-fal-s-join-means.png)

This will yield the following modified plot:

[![09._Diverse_Fal_S_plot_with_line.png](https://learninghub.primer-e.com/uploads/images/gallery/2026-07/scaled-1680-/09-diverse-fal-s-plot-with-line.png)](https://learninghub.primer-e.com/uploads/images/gallery/2026-07/09-diverse-fal-s-plot-with-line.png)

5. You can also choose to show the means as bars instead. Click **Graph** > **Special...**, then (Display Means as > $\bullet$ Bars) and (Error bars > Appearance > $\bullet$ Custom).

[![10a._Diverse_Fal_S_bars+custom_dialog.png](https://learninghub.primer-e.com/uploads/images/gallery/2026-07/scaled-1680-/10a-diverse-fal-s-barscustom-dialog.png)](https://learninghub.primer-e.com/uploads/images/gallery/2026-07/10a-diverse-fal-s-barscustom-dialog.png)

This yields the following plot: 

[![10._Diverse_Fal_S_bars.png](https://learninghub.primer-e.com/uploads/images/gallery/2026-07/scaled-1680-/10-diverse-fal-s-bars.png)](https://learninghub.primer-e.com/uploads/images/gallery/2026-07/10-diverse-fal-s-bars.png)

Next, we shall consider some multi-factor plots.