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Step 4: Ordination

A Quick Guide to PRIMER 5. Example analysis pathway (CLUSTER, M...

The cluster analysis goes some way towards helping us to understand potential patterns of similar...

Updated 5 months ago by Marti

Importing data from Excel

A Quick Guide to PRIMER 4. Getting data in to PRIMER

Step 1. Ensure your data are in a format suitable for import into PRIMER Suppose we have a datase...

Updated 5 months ago by Marti

Download manuals

A Quick Guide to PRIMER 3. Download manuals and examples

The following manuals can be downloaded from within the software itself: Getting Started...: Cl...

Updated 5 months ago by Marti

1.5 The pseudo-F statistic

PERMANOVA+ for PRIMER: Guide to Softwar... Chapter 1: Permutational ANOVA and MANO...

Once the partitioning has been done we are ready to calculate a test statistic associated with th...

Updated 5 months ago by Marti

Download the installer

A Quick Guide to PRIMER 2. Installing PRIMER software

First, head to our download page. Where it says 'Choose your Software', choose 'PRIMER 7 with PE...

Updated 5 months ago by Marti

6.2 ANOSIM for the one-way layout

Change in Marine Communities Chapter 6: Testing for differences betw...

Fig.6.3 displays the MDS based only on the 12 samples (4 replicates per site) from the B, C and D...

Updated 5 months ago by Marti

1.2 Univariate techniques

Change in Marine Communities Chapter 1: A framework for studying cha...

For diversity indices and other single-variable extractions from the data matrix, standard statis...

Updated 5 months ago by Marti

1.1 Introduction

Change in Marine Communities Chapter 1: A framework for studying cha...

The purpose of this opening chapter is twofold: a) to introduce some of the data sets which are u...

Updated 5 months ago by Marti

0.2 Acknowledgements

Change in Marine Communities Introduction and acknowledgements

Any initiative spanning quite as long a period as the PRIMER software represents (the first recog...

Updated 5 months ago by Marti

Basic multivariate analysis

A Quick Guide to PRIMER 6. Some Wizards

A useful analysis pathway (including the Example Analysis Pathway done above, with its five steps...

Updated 5 months ago by Marti

Save your data & workspace

A Quick Guide to PRIMER 4. Getting data in to PRIMER

Save your data in PRIMER (*.pri) format To save a data sheet in PRIMER (*.pri) format, click on t...

Updated 5 months ago by Marti

Opening example data

A Quick Guide to PRIMER 4. Getting data in to PRIMER

Data from the Fal estuary Example datasets in PRIMER can be obtained via the Help menu item. In t...

Updated 5 months ago by Marti

Download example data

A Quick Guide to PRIMER 3. Download manuals and examples

You must be connected to the internet to download the example datasets. The Help menu item in PRI...

Updated 5 months ago by Marti

Post-import data checks

A Quick Guide to PRIMER 4. Getting data in to PRIMER

Check the orientation After import, make sure you have specified the orientation correctly by exa...

Updated 5 months ago by Marti

3.2 Rationale

PERMANOVA+ for PRIMER: Guide to Softwar... Chapter 3: Principal coordinates analys...

It is difficult to visualise patterns in the responses of whole sets of variables simultaneously....

Updated 6 months ago by Arden

0.1 Introduction

Change in Marine Communities Introduction and acknowledgements

Third edition The third edition of this unified framework for non-parametric analysis of multivar...

Updated 6 months ago by Arden

Appendix 3: Bibliography

Change in Marine Communities Appendices

Addison & Clark (1990) Addison, R.F. and Clarke, K.R. (1990) ‘Biological effects o...

Updated 7 months ago by Arden

Overview

A Quick Guide to PRIMER 2. Installing PRIMER software

Here we provide instructions for the download and installation of PRIMER 7 (with PERMANOVA+). Ple...

Updated 7 months ago by Marti

Download

PRIMER v7: User Manual / Tutorial

This manual is available as a free downloadable pdf file. Please click on the following link: Use...

Updated 7 months ago by Marti

0.1 Title page

PERMANOVA+ for PRIMER: Guide to Softwar... Introduction and overview

Updated 7 months ago by Marti